PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC3BG017660.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 469aa MW: 52427.6 Da PI: 7.6004

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG017660.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114	1.6e-35	74	216	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 lp+G++F+Ptd+el+ e+L++kv+++ ++ e+i+++d i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ TRIDC3BG017660.2 74 LPAGVKFDPTDQELI-EHLEAKVREEGsrshplIN--EFIPTIDgedgICYTHPEKLP-GVTMDGLSKHFFHRPSKAYTTGTRKRRKiqtecd 162 799**********.99**99966754422..23444433445******.455567899**************7566666 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l TRIDC3BG017660.2 163 vhKGETRWHKTGKTRPVMA-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 216 4433778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
RSPTPSNSTR LPSRAHAWTP SPAAACEPGD MNRGHISSSE LIDAKLEEHR ISTARHCPNC 60 RHKLDCKPKD WLGLPAGVKF DPTDQELIEH LEAKVREEGS RSHPLINEFI PTIDGEDGIC 120 YTHPEKLPGV TMDGLSKHFF HRPSKAYTTG TRKRRKIQTE CDVHKGETRW HKTGKTRPVM 180 ANGRQKGCKK ILVLYTNFGK HRKPEKTNWV MHQYHLGDLE EEKEGELVVC KIFYQTQPRQ 240 CSWSASSDRG GAGGAVAIAA SAAVTVQEQR MRDSGSGSSS SRDHEALSAT SYPAGYAMAA 300 AVEMQHLKHS GDHFSFTPFR KSFEEVGIGV DQVPSDQLGR SEHQQHAGQE QQPHRPELAT 360 TAVPATAFLV SRPTNPISAT VPPPLQHTSV VLDHDQFHVP AIFLHHEKFQ NMQQQHQHQQ 420 KIDRRSAGLE ELVMGCTSTC TKGETSIPHS QETEWPYPYW PPDNQDHHG

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

RSPTPSNSTR LPSRAHAWTP SPAAACEPGD MNRGHISSSE LIDAKLEEHR ISTARHCPNC  60
RHKLDCKPKD WLGLPAGVKF DPTDQELIEH LEAKVREEGS RSHPLINEFI PTIDGEDGIC  120
YTHPEKLPGV TMDGLSKHFF HRPSKAYTTG TRKRRKIQTE CDVHKGETRW HKTGKTRPVM  180
ANGRQKGCKK ILVLYTNFGK HRKPEKTNWV MHQYHLGDLE EEKEGELVVC KIFYQTQPRQ  240
CSWSASSDRG GAGGAVAIAA SAAVTVQEQR MRDSGSGSSS SRDHEALSAT SYPAGYAMAA  300
AVEMQHLKHS GDHFSFTPFR KSFEEVGIGV DQVPSDQLGR SEHQQHAGQE QQPHRPELAT  360
TAVPATAFLV SRPTNPISAT VPPPLQHTSV VLDHDQFHVP AIFLHHEKFQ NMQQQHQHQQ  420
KIDRRSAGLE ELVMGCTSTC TKGETSIPHS QETEWPYPYW PPDNQDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-114	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG017660.2