PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3BG017480.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 432aa MW: 46983.3 Da PI: 4.9031

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG017480.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.5e-32	254	308	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHerFv+av+ LGGsekAtPk +l+lmk + Lt++hvkSHLQkYR+ TRIDC3BG017480.1 254 KTRMRWTPELHERFVDAVNLLGGSEKATPKGVLKLMKADNLTIYHVKSHLQKYRT 308 68****************************************************8 PP
2	Myb_DNA-binding	56.1	8.4e-18	256	307	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav++lGg t+k + + m ++t +++ks++qky+ TRIDC3BG017480.1 256 RMRWTPELHERFVDAVNLLGGSekaTPKGVLKLMKaDNLTIYHVKSHLQKYR 307 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MERITTNPFY TSGIPVTVPS PLPSATMDES FPRLPDAQNV LLERELRRTP LPPHQSTVAP 60 ICGQFHPSTG SVGPLRSPPA VRFSSVLNPE QYSGANPYIS QTPSTGSSSA MIYGSHHEGF 120 EPTFNDFPRD VGPTWCPDPV ESMLGFSDDV PVGNNLAGIS PIAATDELAK QTEWWTDFMN 180 DDWKDIADNA GAAKTQPQAG PPVQSSISVH QSASQQAGTT SVHQPALQQI VTTQSIESSV 240 VAAPSPSASS NTSKTRMRWT PELHERFVDA VNLLGGSEKA TPKGVLKLMK ADNLTIYHVK 300 SHLQKYRTAR YRPELSEGTS ERLEASKEEL PSIDLKGNFD LTEALRLQLE LQKRLHEQLE 360 VQRSLQLRIE EQGKCLQIMI EQQCNPAADK ALDASTSVEG SKLSCDPPES STGKDVPSSS 420 QNGTTEQAGD KE

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MERITTNPFY TSGIPVTVPS PLPSATMDES FPRLPDAQNV LLERELRRTP LPPHQSTVAP  60
ICGQFHPSTG SVGPLRSPPA VRFSSVLNPE QYSGANPYIS QTPSTGSSSA MIYGSHHEGF  120
EPTFNDFPRD VGPTWCPDPV ESMLGFSDDV PVGNNLAGIS PIAATDELAK QTEWWTDFMN  180
DDWKDIADNA GAAKTQPQAG PPVQSSISVH QSASQQAGTT SVHQPALQQI VTTQSIESSV  240
VAAPSPSASS NTSKTRMRWT PELHERFVDA VNLLGGSEKA TPKGVLKLMK ADNLTIYHVK  300
SHLQKYRTAR YRPELSEGTS ERLEASKEEL PSIDLKGNFD LTEALRLQLE LQKRLHEQLE  360
VQRSLQLRIE EQGKCLQIMI EQQCNPAADK ALDASTSVEG SKLSCDPPES STGKDVPSSS  420
QNGTTEQAGD KE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	3e-66	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG017480.1