PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG016820.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 188aa MW: 20692.8 Da PI: 9.7164 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33 | 1.1e-10 | 3 | 49 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+e+ErrRR riN + Lr+++P k ++Ka+ L ++v+ +k+L+ TRIDC3BG016820.2 3 VHSEAERRRRVRINAHLTALRRMIPDT-----KQMDKAALLARVVDQVKHLK 49 59************************9.....67***************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
LKVHSEAERR RRVRINAHLT ALRRMIPDTK QMDKAALLAR VVDQVKHLKR RAGEAAQQTP 60 AVPPEVSIEF CTGDDDSRLY MKASVSCDDR PDLVAGLIQA LHGLRLRTVR AEVTSLGGRV 120 QHVFTLCKEE DEEGSAAAGL AGLTSLKEAA RLALARVASP ELVCGGSPFQ FQSKRQRILE 180 SHYSIMSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 4e-31 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG016820.2 |