PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG016050.27
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 252aa    MW: 27933.3 Da    PI: 8.7585
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG016050.27genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.8e-1874123255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa+a++ a+++++g
  TRIDC3BG016050.27  74 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 123
                        59****999.**********8...2.359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
STWFHLVIWI ALMNRKKKVR RRSTGPDSVA ETIKKWKEEN QKLLQENGSR KAPAKGSKKG  60
CMAGKGGPEN SNCAYRGVRQ RTWGKWVAEI REPNRGNRLW LGSFPTAVEA ARAYDDAARA  120
MYGAKARVNF SEQSPDASSG CTLAPPLLMS NGATAASHPS DGKDESESAG TVAHKVKKEV  180
SNDLRSTHEE HKTLEVSQPK GKALHKEANV SYDYFNVEEV LDMIIVELSA DVKMEAHEEY  240
QDGDDGFSLF SY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11421NRKKKVRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.13e-33ERF family protein