PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG016050.24
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 254aa    MW: 27883 Da    PI: 7.9747
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG016050.24genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.9e-1876125255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa+a++ a+++++g
  TRIDC3BG016050.24  76 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 125
                        59****999.**********8...2.359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
METGGSKREG DCPGQERKKK VRRRSTGPDS VAETIKKWKE ENQKLLQENG SRKAPAKGSK  60
KGCMAGKGGP ENSNCAYRGV RQRTWGKWVA EIREPNRGNR LWLGSFPTAV EAARAYDDAA  120
RAMYGAKARV NFSEQSPDAS SGCTLAPPLL MSNGATAASH PSDGKDESES AGTVAHKVKK  180
EVSNDLRSTH EEHKTLEVSQ PKGKALHKEA NVSYDYFNVE EVLDMIIVEL SADVKMEAHE  240
EYQDGDDGFS LFSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-33ERF family protein