PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG014740.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 173aa    MW: 19786.5 Da    PI: 11.1718
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG014740.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.33.6e-1774126151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS..EEEEEE- CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg..klyeyss 51 
                       kri n+  r  tf kRr g+lKKA EL vLC+++  +++f  +g  kl++y+s
  TRIDC3BG014740.3  74 KRIHNDVSRRATFGKRRRGLLKKARELAVLCGVDLGLLVFDDDGagKLFDYCS 126
                       79**************************************9985337888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
RLYGGAWRRT ITRGEERRAH PSSQFQSQLL QPLPGRTKKK KNRIRATQAS SSSASIAPRV  60
PSQEKMGRGR TEMKRIHNDV SRRATFGKRR RGLLKKAREL AVLCGVDLGL LVFDDDGAGK  120
LFDYCSPNTS WSELIERYES ITNHKFQFQG INHVDDQVNK QTPPVMYNIH THI