PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG014740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 291aa MW: 33031.2 Da PI: 9.4303 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 52 | 9e-17 | 74 | 125 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS..EEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg..klyeys 50 kri n+ r tf kRr g+lKKA EL vLC+++ +++f +g kl++y+ TRIDC3BG014740.1 74 KRIHNDVSRRATFGKRRRGLLKKARELAVLCGVDLGLLVFDDDGagKLFDYC 125 79**************************************998533788887 PP | |||||||
2 | K-box | 40.2 | 1.4e-14 | 157 | 241 | 14 | 97 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLes.LslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 ++ l +a L++e + L+ + R+ GedL s + eL Leq+Le+ l ++R+ K++ l +q++e+ +k + l+++n Lr+ TRIDC3BG014740.1 157 QQPLADIIAGLRREHDRLEVSVRRQTGEDLPSaATAAELDDLEQRLERVLGEVREMKDKPLEQQLDESYHKVHTLEDQNSFLRRL 241 46666678899*******************7725789*********************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
RLYGGAWRRT ITRGEERRAH PSSQFQSQLL QPLPGRTKKK KNRIRATQAS SSSASIAPRV 60 PSQEKMGRGR TEMKRIHNDV SRRATFGKRR RGLLKKAREL AVLCGVDLGL LVFDDDGAGK 120 LFDYCSPNTS WSELIERYES ITNHKFQFQG INHVDDQQPL ADIIAGLRRE HDRLEVSVRR 180 QTGEDLPSAA TAAELDDLEQ RLERVLGEVR EMKDKPLEQQ LDESYHKVHT LEDQNSFLRR 240 LMGEEGQQRA AVEASAVAPK LPATAFGGSF PEVEEEELTA LRLWPRQLPD V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 4e-16 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG014740.1 |