PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG013090.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 385aa MW: 43706.4 Da PI: 8.2627

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG013090.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.4	9.6e-52	43	171	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrFhPtd e+++ yL +kv +k++++ +++ evd++k++Pw+Lp++++ +ekewyfFs++d+ky+tg r+nrat++gyWkatgkdke++ TRIDC3BG013090.1 43 LPSGFRFHPTDVEIITAYLVPKVLKKPFDT-RAVGEVDLNKHDPWELPEMANMGEKEWYFFSQKDRKYPTGIRTNRATTAGYWKATGKDKEIF 134 699************************9.88***********9888999************************************ PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +l+g+kktLvfykgra+kgekt+W+mheyrle TRIDC3BG013090.1 135 HPpTMSLIGTKKTLVFYKGRAHKGEKTNWIMHEYRLE 171 988889***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
IPSIVTHISI VTPNICATIG PISQRTSAME KHLRVQQQQQ LKLPSGFRFH PTDVEIITAY 60 LVPKVLKKPF DTRAVGEVDL NKHDPWELPE MANMGEKEWY FFSQKDRKYP TGIRTNRATT 120 AGYWKATGKD KEIFHPPTMS LIGTKKTLVF YKGRAHKGEK TNWIMHEYRL ERGKQPAPNL 180 PTDITNTSTI NASSKEEYVV CRIFHKSIGL KKVVMSSFAM PMPMVVERQH GFLESITLPP 240 LMDYNASSSL APPLSVTASS LYQLQATGAS LSMMEGVFLP MMNGHYFGNH HHHQMMVVPP 300 QPSIPFYHHQ QQEQQQHQMM QMMSMDMIVD QGFMVGVEPR SEPSSIVLQE DFLIALSKND 360 PGNDTTTTSD EIMSMNMGMD GMWKY

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

IPSIVTHISI VTPNICATIG PISQRTSAME KHLRVQQQQQ LKLPSGFRFH PTDVEIITAY  60
LVPKVLKKPF DTRAVGEVDL NKHDPWELPE MANMGEKEWY FFSQKDRKYP TGIRTNRATT  120
AGYWKATGKD KEIFHPPTMS LIGTKKTLVF YKGRAHKGEK TNWIMHEYRL ERGKQPAPNL  180
PTDITNTSTI NASSKEEYVV CRIFHKSIGL KKVVMSSFAM PMPMVVERQH GFLESITLPP  240
LMDYNASSSL APPLSVTASS LYQLQATGAS LSMMEGVFLP MMNGHYFGNH HHHQMMVVPP  300
QPSIPFYHHQ QQEQQQHQMM QMMSMDMIVD QGFMVGVEPR SEPSSIVLQE DFLIALSKND  360
PGNDTTTTSD EIMSMNMGMD GMWKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	5e-77	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG013090.1