PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG013060.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 425aa    MW: 45117.9 Da    PI: 7.1779
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG013060.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.27.8e-053153531255
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  TRIDC3BG013060.2 315 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 353
                       7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MMASSSSSSD LSADHQLLQD DLPWPSSSLP PPLAPALHHA VGGNHHQWSQ PLMLEQLSSD  60
ELEALLSAQG HQHHSTHSQL LAAPLTTNPH HQLSSLLMMQ ELGFQWSSSC GTADGDSNET  120
AQDAVKEDAE LPGPLVLPRP SSSSSIAYDD DMAVDVLPSV NISRLQKIPC PVAAGPFGGR  180
AEATLEMLAS AKFCKSLLSC SQASSTVLLH NGGGTAPLLG MGGHHVAYGP PPPVHRLQGP  240
SSILHTYNKQ MSVPAALVSG NGSALQPAAG RSSGGGGLHD EQQLQVVAVS SKKKPRLLHS  300
RPATNNNILP SFKVRKEKLG DRIAALQQLV SPFGKTDTAS VLMEAIGYIK FLQDQVETLS  360
GPYMRSAKHK KARTTQQRGP SDTGDQKEEA KVDLRSRGLC LVPLACTSYV TNENGIWAPP  420
NFRGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.11e-41bHLH family protein