PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG013060.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 424aa    MW: 44989.8 Da    PI: 7.1779
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG013060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.27.8e-053143521255
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  TRIDC3BG013060.1 314 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 352
                       7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MMASSSSSSD LSADHQLLQD DLPWPSSSLP PPLAPALHHA VGGNHHQWSQ PLMLEQLSSD  60
ELEALLSAQG HQHHSTHSQL LAAPLTTNPH HQLSSLLMMQ ELGFQWSSSC GTADGDSNET  120
AQDAVKEDAE LPGPLVLPRP SSSSSIAYDD DMAVDVLPSV NISRLQKIPC PVAAGPFGGR  180
AEATLEMLAS AKFCKSLLSC SQASSTVLLH NGGGTAPLLG MGGHHVAYGP PPPVHRLQGP  240
SSILHTYNKM SVPAALVSGN GSALQPAAGR SSGGGGLHDE QQLQVVAVSS KKKPRLLHSR  300
PATNNNILPS FKVRKEKLGD RIAALQQLVS PFGKTDTASV LMEAIGYIKF LQDQVETLSG  360
PYMRSAKHKK ARTTQQRGPS DTGDQKEEAK VDLRSRGLCL VPLACTSYVT NENGIWAPPN  420
FRGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.19e-42bHLH family protein