PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG003040.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 288aa    MW: 31496.4 Da    PI: 4.7606
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG003040.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.7e-1187135355
                       HHHHHH.HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahner.ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++n++ Er RR+r+N+++  +r ++P+      +K++Ka+i + Av YI +Lq
  TRIDC3BG003040.2  87 ASKNIVeERDRRRRLNEKLYAIRGVVPNI-----TKMDKASIIQDAVAYIEELQ 135
                       5555552799******************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
GRGQREKQSR AMEGGMDASL DFLELEAHLV FDLGDADSKR WMSLADCCSS YLPAEDSLSG  60
LDSSCYNDPT SSPDGATSSR STASTRASKN IVEERDRRRR LNEKLYAIRG VVPNITKMDK  120
ASIIQDAVAY IEELQEQERR ILAEVSDLEA GSCTAVVVKS EASTGSEGVE DAGVGFSTRK  180
KMRRTASSSS INDTVTSPAT HPILLELEVR PIAEKLAVVS MRHDNAQNVM AKMYKALDSL  240
CLKVITSSVT VVDGRTVHTM FIETEEMDSV ETIKEMVQAA LSHLDFSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-37bHLH family protein