PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG001200.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 274aa MW: 29160.5 Da PI: 5.6872 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.4 | 2.9e-09 | 192 | 235 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ + RR+ri +++ L++l+P+ +K++ +++LekA+ Y+k Lq TRIDC3BG001200.2 192 AVAKVRRERISERLKVLQDLVPNG-----TKVDMVTMLEKAITYVKFLQ 235 56799*****************97.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MASKRATTRE LRAMYDDEPS SMSLELFGYH GVVVDGDDED DDTATALPQL SFVDNFKGGC 60 GSAADYYSWA YNASGGTPGA SSSSTSSVLS FEHAGGAGHQ LAYNSGTGDD DCALWMDSMA 120 DHQHGAARFG FMNPGSADVV PEIQESSIKQ PAKSAQKRSS SGGEAQAAAK KQCGGGRKSK 180 AKVVPTKDPQ SAVAKVRRER ISERLKVLQD LVPNGTKVDM VTMLEKAITY VKFLQLQVKV 240 LATDEFWPVQ GGKAPELSQV KTALDAILSS QQQP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66470.1 | 8e-47 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG001200.2 |