PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG000440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 210aa MW: 23437.4 Da PI: 7.3963 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.4 | 1.1e-07 | 29 | 78 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54 +e+Er RR++++ ++L +l+Pk + +++ ++ L + YIk+L TRIDC3BG000440.1 29 RKEAERERRQHMKALCAKLASLIPKeHF--SNPDtMTQLGSLDESASYIKKL 78 579**********************876..55555999999********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
EMDVQAHEAT GRMRGRASGG TTTTRVVERK EAERERRQHM KALCAKLASL IPKEHFSNPD 60 TMTQLGSLDE SASYIKKLKE RVDELHHRRS SAKEMAAARG DSGASTPTTT PTTSGGAGSL 120 EREKHWEAWA PVLEVRQHDD TSLDVVLVCS TERPIMLHEV ITILEEEGAE VINANHSIAG 180 HKIFYTIHSQ VRTYIGTAFH IYARKYNLCC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 3e-11 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG000440.1 |