PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG000410.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 268aa    MW: 28732.6 Da    PI: 10.1696
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG000410.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH223e-0771136455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC.................TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkas..............kapskKlsKaeiLekAveYIksLq 55 
                         + +E++RR +++    +L +l+P +s              + ++   +  + L  A  YIk+L+
  TRIDC3BG000410.2  71 ERKDVEKNRRLHMKGLCLKLSSLVPASSssdhhlrhysssppSSNKDAATQLDQLDSAAAYIKQLR 136
                       56889*********************666***********96666666****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
PQLNHPPSIH TSASAHLLLL SLPPSIRPPW DWERRDQAQL TSTMKSRRQS GRGGAMLLPD  60
GNLHSSGSKM ERKDVEKNRR LHMKGLCLKL SSLVPASSSS DHHLRHYSSS PPSSNKDAAT  120
QLDQLDSAAA YIKQLRGRID DLKRRKQAAV SGTAGCSSSI STGDYKGAPS TATTALPVIE  180
VRHQDGTLDV ALVSEVGRPF RLHEVIAVLE QEGAEVVSAS FSVVGDKIFY TVHSQALYPR  240
IGLEAGRVAQ GLRGLAAAAA VSPSVLLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-18bHLH family protein