PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG076030.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 159aa MW: 17749.3 Da PI: 9.8103 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.4 | 2.6e-20 | 23 | 57 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C C+ttkTplWR gp+g+k+LCnaCG++yrk+++ TRIDC3AG076030.2 23 CDDCNTTKTPLWRGGPNGPKSLCNACGIRYRKRRR 57 99******************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
KMVEVEAAAD PEERTASGDP KACDDCNTTK TPLWRGGPNG PKSLCNACGI RYRKRRRVAM 60 GLDPEAKRKP KRDDAALSKA EASSTKEEEE EEEEKASTNK IKTKTTTHTV ELHMVGFAKD 120 AVLKQRRRMR MRRRKPSCLG EEERAAILLM SLSSGVIYA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 53 | 57 | RKRRR |
2 | 54 | 58 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 2e-20 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG076030.2 |