PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG070010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 244aa    MW: 26930.6 Da    PI: 9.3684
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG070010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.72.1e-1370122155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       r+ +hn+ Er RR+++N+ ++ Lr+llP  +   + kKls   ++ ++ +YI +Lq
  TRIDC3AG070010.1  70 RKISHNAYERDRRKQLNELYSDLRSLLPDtD---HTKKLSIPITVSRVLKYIPELQ 122
                       6889*************************55...7777***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGHQHQMFED PFASSISSLE ADIFSVAAGH HHPQWPGLDH DVPLAPAANN GTSSGGYGSP  60
GGGDGSGSHR KISHNAYERD RRKQLNELYS DLRSLLPDTD HTKKLSIPIT VSRVLKYIPE  120
LQKQVDGLEK KKEELTRANC KPGVLTMKEN MAPIVSATCL DDREIMVQVS LVSTMAGVLP  180
MSKCIKVLEN EGLRLISSST SAFHNRTFYS LHLQKTQQST SFPAMSTAVG PHKRIRIYQN  240
LKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-31bHLH family protein