PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG063760.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 256aa    MW: 28913.6 Da    PI: 4.9509
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG063760.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB52.41.2e-16211031185
             NF-YB  11 anvsrimkkvlPanakiskdaketvqecv........sefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 
                       a +++i+k++lP + ++++d+++++ ec         sefi +++se++d c r+++kti+++ ++ al +lGf++yve++ +
  TRIDC3AG063760.3  21 ATMTKIIKEMLPPDVRVARDTQDLLVECClvyvvliySEFINLLSSESNDVCSRDDKKTIAPEHVIRALQDLGFKEYVEEVYA 103
                       6789***********************95445556668*****************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
RPPTNYPREQ LLGTSISYNN ATMTKIIKEM LPPDVRVARD TQDLLVECCL VYVVLIYSEF  60
INLLSSESND VCSRDDKKTI APEHVIRALQ DLGFKEYVEE VYAAYEQHKL ETLDSPKATK  120
FTGIEMTEEE AVAEQQRMFA EARARMNNGA AKPKEPALEP QNQPQQPPQP HLQLHPQAQQ  180
PPQPQPQLHY PQSQQPLQPF TQAPPQQPLH PQLQQYTQAP PQQPLQPPLQ LYPQAQPEQP  240
LQPQSSGSTT GTCVIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.41e-49NF-YB family protein