PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG062540.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 118aa    MW: 12216 Da    PI: 10.5418
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG062540.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.51e-077296730
                      HHHHHHHHHHHHHHHHHHCTSCC.C CS
               HLH  7 erErrRRdriNsafeeLrellPk.a 30
                      ++ErrRR+++N+++  Lr+++Pk +
  TRIDC3AG062540.4 72 MAERRRRKKLNDRLYMLRSVVPKiS 96
                      89********************955 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
GGFLAPPLSA FGDGMGWDDE NELDQQSVDA SSLGVSASLE NAVVGAPGGG GGGGGGGNGK  60
GKKKGMPAKN LMAERRRRKK LNDRLYMLRS VVPKISKVRN APAVISVEIN HLLVPIHI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16280KKKGMPAKNLMAERRRRKK
27481ERRRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.12e-16bHLH family protein