PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG062540.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 254aa MW: 26960.8 Da PI: 6.7663 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.2 | 5.3e-12 | 66 | 108 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L TRIDC3AG062540.2 66 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 108 79*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
PLSAFGDGMG WDDENELDQQ SVDASSLGVS ASLENAVVGA PGGGGGGGGG GNGKGKKKGM 60 PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIDYLKELLQ RISDLHSELE 120 SAPSSAALGG PSTANSFLPS TPTLQPFPGR IKEERCPPAP FPSPSGQQAT VEVRMREGQA 180 VNIHMFCARR PGILLSTMRA LDSLGLDIEQ AVISCFDGFA MDVFRAEQCR DGPGLLPEEI 240 KAVLLHCAGL QNAM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 56 | 74 | KKKGMPAKNLMAERRRRKK |
2 | 68 | 75 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12860.1 | 3e-90 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG062540.2 |