PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG062320.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 232aa    MW: 25623.6 Da    PI: 5.8881
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG062320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.59e-121792191055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +rRR+riN+++ eL+ l+P+      +K++ +++Le+Av+Y+k Lq
  TRIDC3AG062320.2 179 KRRRERINEKLRELQNLIPNG-----TKVDISTMLEEAVQYVKFLQ 219
                       9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MEAKCAAIWS SVDGRSEESE MIAHLQSMFW SNSDAAVNLC SPNTSDNSCV TASTVHSNLF  60
LPLDMESHAT TPMVNTGMDL CFDHRHQTVT GHKRTSHMDE QIKRTSKKSR TVPSVSDAPC  120
LSLADNETNG DTVNQSSSSC CSSEEDLIDA SEESFVPNQG DNSRGCKRPS KNLQSLCAKR  180
RRERINEKLR ELQNLIPNGT KVDISTMLEE AVQYVKFLQL QIKVVSTCLC SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-26bHLH family protein