PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG061340.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 821aa MW: 92422.7 Da PI: 7.3182

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG061340.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	151.9	1.5e-47	16	131	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwlk++e+++iL+n e + +++ +++rp+ gs++L+nr++ r+fr+DGy w+kkk+gk+ +E+he LKv++v++l+cyYa++e+np f TRIDC3AG061340.4 16 REvKTRWLKPREVLDILQNCELFGIQNRTPQRPPGGSWFLFNRRVHRFFRNDGYVWQKKKNGKSGNEAHEYLKVDNVKALNCYYARAENNPRF 108 56699************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylev 117 rr+yw+Le ++e+ivlvhy++v TRIDC3AG061340.4 109 MRRIYWMLEPAYEHIVLVHYRDV 131 ******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence
MQQQQRQGHD ILNLQREVKT RWLKPREVLD ILQNCELFGI QNRTPQRPPG GSWFLFNRRV 60 HRFFRNDGYV WQKKKNGKSG NEAHEYLKVD NVKALNCYYA RAENNPRFMR RIYWMLEPAY 120 EHIVLVHYRD VLEGSISVSV LNGSPTSNQN GSASRADAHS SPGLTSEIVA PLLNSCSPGS 180 AEEVSSQIPT INNETNDISL FDWRRTLEMQ LSLENKERHD VNTDEVLPNH DPIPAHGIQN 240 EELDACINLA DVFDLGFSED NHAEGSHPYP DPIDVLKYSA PVTIDENQWF HLHEVSPEWA 300 FCSESAKVVI VGDFPCNLSN SSWVLFGDVK VPAVVVQQGV IRCYTPPYLG AGKVRMCMLD 360 ENGKPCTEDR EFEFVEKPTN TMINGNGKPC SEAREFEFQQ RPTKSDNGLL LLINYVQMLF 420 DSHGCELFSK FRLPLPNARS GFPVNPSEII GRTCEQLDHE NAVNCIMEVM LNNKFQDWLS 480 SKFEQNSEGE YLLPRQYHGV IHTIAALGYD WALKPLLSNG VPINYRDANG WTALHWAARF 540 GREQMVAVLV VAGAAVGALS DPTAEDPAAK TPASIASAYG FIGISAFLSE AQLTSTLDSL 600 ESKENGKPVD HNGGVSTSNA VDRVSDKCAH VDGGTDDQLA LKDSLGAIRN AVQAAGRIQA 660 TFRVFSLKKK KQKALQNGDS SASPSMLERA TLSIQKNFRC WKKRKEYQKI RKNVIKIQAR 720 FRAHRERNKY KELLQSVGIL EKIMLRWFRK GVGLRGINSR AMPIDQDEEE DIVKVFRKER 780 VETAVSEAVS RVSAIVGCPV ARLDYRRMLE MHQQAKIGHG K

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence

MQQQQRQGHD ILNLQREVKT RWLKPREVLD ILQNCELFGI QNRTPQRPPG GSWFLFNRRV  60
HRFFRNDGYV WQKKKNGKSG NEAHEYLKVD NVKALNCYYA RAENNPRFMR RIYWMLEPAY  120
EHIVLVHYRD VLEGSISVSV LNGSPTSNQN GSASRADAHS SPGLTSEIVA PLLNSCSPGS  180
AEEVSSQIPT INNETNDISL FDWRRTLEMQ LSLENKERHD VNTDEVLPNH DPIPAHGIQN  240
EELDACINLA DVFDLGFSED NHAEGSHPYP DPIDVLKYSA PVTIDENQWF HLHEVSPEWA  300
FCSESAKVVI VGDFPCNLSN SSWVLFGDVK VPAVVVQQGV IRCYTPPYLG AGKVRMCMLD  360
ENGKPCTEDR EFEFVEKPTN TMINGNGKPC SEAREFEFQQ RPTKSDNGLL LLINYVQMLF  420
DSHGCELFSK FRLPLPNARS GFPVNPSEII GRTCEQLDHE NAVNCIMEVM LNNKFQDWLS  480
SKFEQNSEGE YLLPRQYHGV IHTIAALGYD WALKPLLSNG VPINYRDANG WTALHWAARF  540
GREQMVAVLV VAGAAVGALS DPTAEDPAAK TPASIASAYG FIGISAFLSE AQLTSTLDSL  600
ESKENGKPVD HNGGVSTSNA VDRVSDKCAH VDGGTDDQLA LKDSLGAIRN AVQAAGRIQA  660
TFRVFSLKKK KQKALQNGDS SASPSMLERA TLSIQKNFRC WKKRKEYQKI RKNVIKIQAR  720
FRAHRERNKY KELLQSVGIL EKIMLRWFRK GVGLRGINSR AMPIDQDEEE DIVKVFRKER  780
VETAVSEAVS RVSAIVGCPV ARLDYRRMLE MHQQAKIGHG K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	668	705	KKKKQKALQNGDSSASPSMLERATLSIQKNFRCWKKRK
2	702	731	KKRKEYQKIRKNVIKIQARFRAHRERNKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	3e-95	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG061340.4