PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG059850.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 480aa MW: 50268.1 Da PI: 6.6774

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG059850.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.3	1.6e-09	278	325	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq TRIDC3AG059850.3 278 SHSLAERVRREKISQRMKLLQDLVPGC----NKVVGKAVMLDEIINYVQSLQ 325 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
QPDQLPPATA GFLNLNWDSS MDASHPMASS PASNSAAATE GLALHGISPR PQPHYGAGGT 60 PLGSPTKLNL SMMGQYRHHH HHSPYPPPPP QVRGAGLPTL ENLMPMGSLD QFLADPGFAE 120 RAARLSGFDA RGGYGPGGPG PAQFGLPDDG PVGALKELEL GSARDDSSVS DPASAGAGMA 180 LKGASDGNAR KRKAGGGGSK GKGKDASVST TSAKDLLAKR CRSMSMEEAE ENSGKGKAAQ 240 SSSENGGRRQ GKDGASKLPE PPKDFIHVRA RRGEATDSHS LAERVRREKI SQRMKLLQDL 300 VPGCNKVVGK AVMLDEIINY VQSLQRQVEF LSMKLATVNP QLDFNSLPSL LAKDMQQQSC 360 GQLQQGSSHF FPLDASGAPL PYMGGQGSSD PLGCGMSDGG GMGDDHGAMH PLDQAFCRPM 420 GSQQQHFLSD AAASQVGAFW QDLQSVVQMD MGQSQEIATS SNSYDVRLVA DGPHENGALT

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

QPDQLPPATA GFLNLNWDSS MDASHPMASS PASNSAAATE GLALHGISPR PQPHYGAGGT  60
PLGSPTKLNL SMMGQYRHHH HHSPYPPPPP QVRGAGLPTL ENLMPMGSLD QFLADPGFAE  120
RAARLSGFDA RGGYGPGGPG PAQFGLPDDG PVGALKELEL GSARDDSSVS DPASAGAGMA  180
LKGASDGNAR KRKAGGGGSK GKGKDASVST TSAKDLLAKR CRSMSMEEAE ENSGKGKAAQ  240
SSSENGGRRQ GKDGASKLPE PPKDFIHVRA RRGEATDSHS LAERVRREKI SQRMKLLQDL  300
VPGCNKVVGK AVMLDEIINY VQSLQRQVEF LSMKLATVNP QLDFNSLPSL LAKDMQQQSC  360
GQLQQGSSHF FPLDASGAPL PYMGGQGSSD PLGCGMSDGG GMGDDHGAMH PLDQAFCRPM  420
GSQQQHFLSD AAASQVGAFW QDLQSVVQMD MGQSQEIATS SNSYDVRLVA DGPHENGALT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-53	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG059850.3