PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG059790.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 715aa MW: 83843.3 Da PI: 8.4213

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG059790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.7	2.2e-24	25	119	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA e GFsvrk + + + n++i+ r++vCs+eg ree++ k ++++r++++ tr+gCk k+++ + +g+w v+++ eHnH+l TRIDC3AG059790.2 25 EFYNKYALEKGFSVRKGYVEWDEANEKIILRKLVCSREGCREEKHMKrkrEDRKRKPQNITRVGCKSKFVIARVAkTGRWFVKDFIDEHNHPL 117 6***************************************999887778889999**********99988**************9 PP FAR1 90 ap 91 ap TRIDC3AG059790.2 118 AP 119 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
ISAECMAEYD DIVSRMFDSE EEGFEFYNKY ALEKGFSVRK GYVEWDEANE KIILRKLVCS 60 REGCREEKHM KRKREDRKRK PQNITRVGCK SKFVIARVAK TGRWFVKDFI DEHNHPLAPR 120 DLACFLRSHR RISDEQKADI IEMQSVGIRK HKIMDVLCMQ SGGYDHVGCM LRDIYNFCHR 180 YKQETVAAGD AQTVIRHMMA RQERDPDYFF KYLVDKDGHL KGLFWSDTQS RLDYEAFGDV 240 VVFDSTYRTN KYNLPFVPFV GLNHHRSTVI FGCGIISHET NEAYEWMLRT FSEAMLQKHP 300 ISVITNGDLA MQRAIRVVWP DSYHRLCVWH IQQNIVRHLH DDEVREEFRS FIYDSSSIEE 360 HERKWIEFLR RNEVTSEESW LHQMYQMRKL WCAPYLVGRC FLGLSSNQRS ESLNSMLHTH 420 LEGKMTLFDM LEHYERCLSG RRLNEAILDI VALQSIPFTD ADASSLEKHA ARVFTPCMFQ 480 LVRWSINAVS KCVISEILDA WELTTYVVAK IDRREKKFEV RCEMKEGSLY RISCSCRKLE 540 CLGTPCSHIF YILGIRQVEV LPRCCVPMRW TMSAKSAFPP TRKSEMYDYS ASLVRYRELR 600 NLSHVACFRA CQSSEEYQRL KMILSEQVGS KESSRGQEEC IRFGPVLPQT TEIDCGDLEK 660 VLDPVHVQGR GAPKKRLQAK MKKQRSKRKC GYCGVEGHDR RTCNKLKEVS NMSNF

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

ISAECMAEYD DIVSRMFDSE EEGFEFYNKY ALEKGFSVRK GYVEWDEANE KIILRKLVCS  60
REGCREEKHM KRKREDRKRK PQNITRVGCK SKFVIARVAK TGRWFVKDFI DEHNHPLAPR  120
DLACFLRSHR RISDEQKADI IEMQSVGIRK HKIMDVLCMQ SGGYDHVGCM LRDIYNFCHR  180
YKQETVAAGD AQTVIRHMMA RQERDPDYFF KYLVDKDGHL KGLFWSDTQS RLDYEAFGDV  240
VVFDSTYRTN KYNLPFVPFV GLNHHRSTVI FGCGIISHET NEAYEWMLRT FSEAMLQKHP  300
ISVITNGDLA MQRAIRVVWP DSYHRLCVWH IQQNIVRHLH DDEVREEFRS FIYDSSSIEE  360
HERKWIEFLR RNEVTSEESW LHQMYQMRKL WCAPYLVGRC FLGLSSNQRS ESLNSMLHTH  420
LEGKMTLFDM LEHYERCLSG RRLNEAILDI VALQSIPFTD ADASSLEKHA ARVFTPCMFQ  480
LVRWSINAVS KCVISEILDA WELTTYVVAK IDRREKKFEV RCEMKEGSLY RISCSCRKLE  540
CLGTPCSHIF YILGIRQVEV LPRCCVPMRW TMSAKSAFPP TRKSEMYDYS ASLVRYRELR  600
NLSHVACFRA CQSSEEYQRL KMILSEQVGS KESSRGQEEC IRFGPVLPQT TEIDCGDLEK  660
VLDPVHVQGR GAPKKRLQAK MKKQRSKRKC GYCGVEGHDR RTCNKLKEVS NMSNF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	80	KREDRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-100	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG059790.2