PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG055870.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 276aa    MW: 30287.7 Da    PI: 10.0224
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG055870.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS210.59.2e-6570275164374
              GRAS 164 rLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256
                        ++ +Aeelg+ +ef++ v ++le+l++++L ++ +Ea+a+n+vl+lh +++es    +   +vL+++++lsPk +v+veq+a hn++ Fl r
  TRIDC3AG055870.2  70 VIEAYAEELGMCLEFRA-VDRTLESLHVDDLCIDAHEAVAINSVLELHCVVKESRGALN---SVLQTIRKLSPKAFVLVEQDAGHNGPFFLGR 158
                       57889************.799******************************88877777...8****************************** PP

              GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdg 348
                       f+eal+yy+alfd+l+a lpr +  r+ vE++  g ei+nvv cega+r+erhe++ +Wr+r+++aGF+++p++    ++a+  l++ + + g
  TRIDC3AG055870.2 159 FMEALHYYAALFDALDAALPRYDARRARVEQFHYGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQSLPIKMA--AKAREWLEEKAgGSG 249
                       ************************************************************************9754..455666665555*** PP

              GRAS 349 yrveeesgslvlgWkdrpLvsvSaWr 374
                       y+v ee+g+lvlgWk++p++++S+W+
  TRIDC3AG055870.2 250 YTVAEEKGCLVLGWKGKPVIAASCWK 275
                       *************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
PRSTTSARRT TPHGRLRRPT SSRRASGRRS RHGVPARRVV LRAGPCGPAG LGAPTGAGAG  60
EHGVQRPAVV IEAYAEELGM CLEFRAVDRT LESLHVDDLC IDAHEAVAIN SVLELHCVVK  120
ESRGALNSVL QTIRKLSPKA FVLVEQDAGH NGPFFLGRFM EALHYYAALF DALDAALPRY  180
DARRARVEQF HYGAEIRNVV GCEGAARVER HERADQWRRR MSRAGFQSLP IKMAAKAREW  240
LEEKAGGSGY TVAEEKGCLV LGWKGKPVIA ASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.17e-35GRAS family protein