PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG055860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 485aa    MW: 52708.1 Da    PI: 6.51
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG055860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS357.22.4e-1091124841374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal...ppsetseknsseelaalklfsevsPi 90 
                       lv+lL++cAeav+ +d ++a alL +l+  a  +g+++qR+a++f+++La rla   +          + + s+     +  al + +e++P+
  TRIDC3AG055860.1 112 LVQLLVACAEAVACRDRAQAAALLRELQVGAPVHGTAFQRVASCFVQGLADRLALAHPPALGPAsmaFCVPRSSCLDGARGEALAVAYELCPY 204
                       689**************************************************996655543331113444444447778888899******* PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGl....QWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                       l+f+h++aN  Ilea+eg++ vH++D+++++Gl    QW aLl++La+R+ ++p+++R+Tgvg+    + ++++++g+ L+ +Aeelg+++ef
  TRIDC3AG055860.1 205 LRFAHFVANTSILEAFEGKTNVHVVDLGMTMGLnrghQWRALLDSLATRAcGKPARVRVTGVGA----RVDTMRAVGRELEAYAEELGMTLEF 293
                       ***************************9865433333*************77777*********....9************************ PP

              GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                        + v ++le+l++++L v+ +Ea+a+n+vl+lh +++es    +   +vL+++++lsPk +v+veq+a hn++ Fl rf+eal+yy+alfd+l
  TRIDC3AG055860.1 294 MA-VDRTLESLHVDDLGVEADEAVAINSVLELHCVVKESRGALN---SVLQTIRKLSPKAFVLVEQDAGHNGPFFLGRFMEALHYYAALFDAL 382
                       **.799******************************88877777...8********************************************* PP

              GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWk 363
                       +a lpr +  r+ vE++ +g ei+nvv cega+r+erhe++ +Wr+r+++aGF+++p++   a++a+  l++ + + gy+v ee+g+lvlgWk
  TRIDC3AG055860.1 383 DAALPRYDARRARVEQFHFGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQAMPFKM--AAKAREWLEENAgGSGYTVAEEKGCLVLGWK 473
                       *********************************************************975..4567777877777****************** PP

              GRAS 364 drpLvsvSaWr 374
                       ++p++++S+W+
  TRIDC3AG055860.1 474 GKPVIAASCWK 484
                       **********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
YYFGIEEVAV DADELELGLR AHKATRVDYL SSPYQASWPP AQADLESSRV RKTKQFRDVL  60
ETCKQKVEAM EAMERSSSPV GSGGFEEQGE AVVAVDDARA GGGGSGADGM RLVQLLVACA  120
EAVACRDRAQ AAALLRELQV GAPVHGTAFQ RVASCFVQGL ADRLALAHPP ALGPASMAFC  180
VPRSSCLDGA RGEALAVAYE LCPYLRFAHF VANTSILEAF EGKTNVHVVD LGMTMGLNRG  240
HQWRALLDSL ATRACGKPAR VRVTGVGARV DTMRAVGREL EAYAEELGMT LEFMAVDRTL  300
ESLHVDDLGV EADEAVAINS VLELHCVVKE SRGALNSVLQ TIRKLSPKAF VLVEQDAGHN  360
GPFFLGRFME ALHYYAALFD ALDAALPRYD ARRARVEQFH FGAEIRNVVG CEGAARVERH  420
ERADQWRRRM SRAGFQAMPF KMAAKAREWL EENAGGSGYT VAEEKGCLVL GWKGKPVIAA  480
SCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-58GRAS family protein