PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG055280.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 280aa    MW: 30418.7 Da    PI: 8.4765
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG055280.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.81.8e-1811317127
               NAM   7 FhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgk 88 
                       F Ptd+elv++yL+++++g++    ++++++e+d+y ++P +L +       ++++e+k+wyfFs  + ++a++ rk r++   +g+Wk+   
  TRIDC3AG055280.2   1 FCPTDSELVSFYLRPRISGQPlpDATKQFFHEADVYATDPASLVSgrlpgpaRAQGESKNWYFFSLVKPRSAQDVRKCRIVGggKGTWKQERG 93 
                       89*******************64333456**************6446788877788899********************76656899**8877 PP

               NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                       +  v  ++g++vg  + +++    +++ +  + +m e++
  TRIDC3AG055280.2  94 NDVV-GAEGHAVGRLEKFTYTPSPKEDKKPPEGLMMEFS 131
                       5555.55999*********99666666566677777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
FCPTDSELVS FYLRPRISGQ PLPDATKQFF HEADVYATDP ASLVSGRLPG PARAQGESKN  60
WYFFSLVKPR SAQDVRKCRI VGGGKGTWKQ ERGNDVVGAE GHAVGRLEKF TYTPSPKEDK  120
KPPEGLMMEF SVGQEDGGEP RPVLCLCKIY QSPRFLKFAS KNSVSARKRK TPDDGPRLSP  180
PSLHASAPKK SKAPMDESPA ARRQLLFPSL PPPSNLPSPV PSPPPSAPNP VVELEDDFLA  240
KILADPEMNW SWEELSAPLP CSMTAVAPAL LGSCHGSQCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-10NAC family protein