PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG054510.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 245aa    MW: 25866.1 Da    PI: 9.1692
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG054510.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-192372255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a++ a+++++g
  TRIDC3AG054510.3 23 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDDAALRFRG 72
                      7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
DTMEEHRSRS PASSNVAEAP RRRYRGVRQR PWGKWAAEIR DPHKAARVWL GTFETAEAAA  60
RAYDDAALRF RGSRAKLNFP EDARLHPATV TPAAAPARAP IAAQSASTPA MYAGSTQASD  120
YLRYQMLLQG RGAAAANQAY GGGVMSSSYG GGGGGGGTMS GFLGSYYSFP SSSVSVATVP  180
SSSSASSAPG HHYSSPHDPQ QHQQQQGDAA AEWSWESALA PDPGTTTAAS WSDSSQQPYH  240
PPHTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.13e-15ERF family protein