PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG052650.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 274aa    MW: 29992.8 Da    PI: 8.1522
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG052650.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-172266147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r+++T+eEd+ ++ a++ +G++ W++Ia+ +  gRt++ +k++w++ 
  TRIDC3AG052650.1 22 RKPFTEEEDQMIISAHAIHGNK-WASIAKLLV-GRTDNAIKNHWNST 66
                      789*******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
PGRSGKSCRL RWCNQLDPQL KRKPFTEEED QMIISAHAIH GNKWASIAKL LVGRTDNAIK  60
NHWNSTLRRR YCTGTRCTRS ASAEQPMREM SRAVSEERWP LSGPSSFSVM EVKEAPVQTV  120
SETSAGALQI RDINNCSTEA VDRSYPVRPV ATVGAFRPYS LGPAQQMQME MSSSTKFVPT  180
IQALTPEIAV SKFADTTCFA ADVPNKCGHG CCSAEEQPRN NSLLGPEFKE FIDHPPILSS  240
SFASLVSEIS SIAWMNGGLQ SSNSGNLVQS NPPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.12e-56MYB family protein