PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG051860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 722aa    MW: 80461.2 Da    PI: 6.4431
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG051860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS374.21.6e-1143477162374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cA+ vs +d + a+ lL++++++as +gd  qRla++f+++L+arla+++s++yk  + s+ +    +++l+a++l+  ++P+ k+s
  TRIDC3AG051860.1 347 ETLLIHCAQSVSIDDRRSATDLLKQIRQHASATGDGDQRLAHCFANGLEARLAGNGSQIYKLHTISRFA---CTDVLKAYQLYLAACPFKKIS 436
                       789**********************************************************99999999...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h  aNq+I++ave++++vHi+Df++ +G+QWp+L+q L++R +gpp+lRiT+++ p++g   +e++ee+g+ L+++A++++vpf+++  +a++
  TRIDC3AG051860.1 437 HYFANQTIMNAVEKAKKVHIVDFGVYYGFQWPCLIQRLSKRLGGPPELRITAIDTPQPGfrPAERIEEIGRYLSDYAQTFKVPFKYHG-IASQ 528
                       ****************************************************************************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L+++++E l+Vn++++ ++l+desv  es+r+ vL+++++++P+v+++   + ++n++ F+ rf eal  +sa fd+lea++pr+
  TRIDC3AG051860.1 529 FEAVRVEDLHIEKDEILIVNSMFRFKTLMDESVVAESPRNMVLNTIRKMKPHVFIHGVTNGSYNAPFFVSRFREALFQFSAHFDMLEANIPRD 621
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       +eer  +E  +++re+ nv++ceg er er et+++W+ r ++aGFk++pl+ +++k a+  ++ ++++ + ++e++ +l++gWk+r L+++S
  TRIDC3AG051860.1 622 NEERLLIESTIFSREAINVISCEGMERMERPETYKQWQVRNQRAGFKQLPLDPEIMKRAREKVKCYHKN-FIIDEDNRWLLQGWKGRILYALS 713
                       ****************************************************************99966.*********************** PP

              GRAS 372 aWr 374
                        W+
  TRIDC3AG051860.1 714 TWK 716
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    
AAAGQAHPQP DDSEVFSDIV LGYINRMLMA EDIDEKFDHY PAHPALLAAE KPFLEILADQ  60
PPCSGGSTVE SPDGSSVTTN SFNSHGSCNC AAPSGGGLGA MQAPPALEFP TAEFLQPPQF  120
YQDLSPESCV VEAGGAWPPY DAMEFNPLPD ALLSQSSSFA SSNGSSVAFS EGFEPWLSTA  180
GAVPDAALSD FVLQSQQAAQ FSRGFEEASR FLPQESKLVI DVDSLPSVWV KEDKKVVEVK  240
KEKADSEVAI HRGKKHFYGD DLDADEVRCC KHSAPVVDAD HLVREMMDKV LLCNGETCSR  300
GVKELREALQ HDVAAHSGGA HGKGSGHGKG RGKKQVKQPK KEVVDLETLL IHCAQSVSID  360
DRRSATDLLK QIRQHASATG DGDQRLAHCF ANGLEARLAG NGSQIYKLHT ISRFACTDVL  420
KAYQLYLAAC PFKKISHYFA NQTIMNAVEK AKKVHIVDFG VYYGFQWPCL IQRLSKRLGG  480
PPELRITAID TPQPGFRPAE RIEEIGRYLS DYAQTFKVPF KYHGIASQFE AVRVEDLHIE  540
KDEILIVNSM FRFKTLMDES VVAESPRNMV LNTIRKMKPH VFIHGVTNGS YNAPFFVSRF  600
REALFQFSAH FDMLEANIPR DNEERLLIES TIFSREAINV ISCEGMERME RPETYKQWQV  660
RNQRAGFKQL PLDPEIMKRA REKVKCYHKN FIIDEDNRWL LQGWKGRILY ALSTWKANPQ  720
SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-171GRAS family protein