PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG051660.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 582aa MW: 63717.2 Da PI: 7.8644

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG051660.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.4e-16	67	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT +Ede l +av+ + g++Wk+Ia+ ++ Rt+ qc +rwqk+l TRIDC3AG051660.1 67 KGGWTSQEDETLRKAVETFNGRSWKKIAEFFP-DRTEVQCLHRWQKVL 113 688***************************.**********986 PP
2	Myb_DNA-binding	63.6	3.7e-20	119	165	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++d+vk++G+ W+ Iar ++ gR +kqc++rw+++l TRIDC3AG051660.1 119 KGPWTQEEDDKIIDLVKKYGPTKWSVIARSLP-GRIGKQCRERWHNHL 165 79****************************.***********97 PP
3	Myb_DNA-binding	60.5	3.5e-19	171	214	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT+eE++ l++a++++G++ W+ Ia+ ++ gRt++++k++w++ TRIDC3AG051660.1 171 KDAWTAEEEQALINAHREYGNK-WAEIAKVLP-GRTDNSIKNHWNS 214 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MGAMAEEAEH EGCVENRQPL AASSESVSEG SSYGGAGAPA RMSPPVSGSV NSVSGLRRTS 60 GPIRRAKGGW TSQEDETLRK AVETFNGRSW KKIAEFFPDR TEVQCLHRWQ KVLNPELIKG 120 PWTQEEDDKI IDLVKKYGPT KWSVIARSLP GRIGKQCRER WHNHLNPDIR KDAWTAEEEQ 180 ALINAHREYG NKWAEIAKVL PGRTDNSIKN HWNSSLRKKL DVYGTRNILA IPRLVGHDDF 240 KDKQKSLASE GHLDLNTVPG ITSKNLPEIA HHSNFSSHLQ SYKLDHAKDR SGFLSISFLP 300 TVQPLTSYEV SSVVNGSAVT SAAQGLESDS VRDKGLEIIS VHEKGLKVDS TLDTLGEPDS 360 TQLEAVPAKG EESSLKNDAQ SSLGPLCYQI PNMNDVAPAS SSLISEHQTV HQTSEHCRNG 420 ALSPNGCTTP TKGTMSVQLS VDSILKIAAD SFPVTPSILR RRKRERPTPA SDLKFSEPNT 480 DSFYTPAGKR PATDTPESFR TASFLSLGSL DGLSSSARGF DVSPPYRIRA KRMCLTKSVE 540 KQLDFSSNGL GTCGSEVLNS PHQNSQSTHS LSEASIMKEK EL

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MGAMAEEAEH EGCVENRQPL AASSESVSEG SSYGGAGAPA RMSPPVSGSV NSVSGLRRTS  60
GPIRRAKGGW TSQEDETLRK AVETFNGRSW KKIAEFFPDR TEVQCLHRWQ KVLNPELIKG  120
PWTQEEDDKI IDLVKKYGPT KWSVIARSLP GRIGKQCRER WHNHLNPDIR KDAWTAEEEQ  180
ALINAHREYG NKWAEIAKVL PGRTDNSIKN HWNSSLRKKL DVYGTRNILA IPRLVGHDDF  240
KDKQKSLASE GHLDLNTVPG ITSKNLPEIA HHSNFSSHLQ SYKLDHAKDR SGFLSISFLP  300
TVQPLTSYEV SSVVNGSAVT SAAQGLESDS VRDKGLEIIS VHEKGLKVDS TLDTLGEPDS  360
TQLEAVPAKG EESSLKNDAQ SSLGPLCYQI PNMNDVAPAS SSLISEHQTV HQTSEHCRNG  420
ALSPNGCTTP TKGTMSVQLS VDSILKIAAD SFPVTPSILR RRKRERPTPA SDLKFSEPNT  480
DSFYTPAGKR PATDTPESFR TASFLSLGSL DGLSSSARGF DVSPPYRIRA KRMCLTKSVE  540
KQLDFSSNGL GTCGSEVLNS PHQNSQSTHS LSEASIMKEK EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-106	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG051660.1