PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3AG051270.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 139aa MW: 14053.9 Da PI: 11.8458 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.00053 | 78 | 100 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F L H+r+H TRIDC3AG051270.3 78 HECPVCGLEFAVGQALGGHMRRH 100 79********************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 139 aa Download sequence |
GQPGHGPPAH APRAAAPAAP APARRRRGGA GDGRRPRVRV QDVQPAVPHV PGARRAPRQP 60 QAPQAAPSAA APARPRAHEC PVCGLEFAVG QALGGHMRRH RVEAEAATNA PSSKAAAPET 120 ALASCDAGGI CLDLNLTPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28710.1 | 6e-12 | C2H2 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3AG051270.3 |