PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG044310.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 278aa MW: 30101.5 Da PI: 7.9831

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG044310.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95.9	7.7e-30	51	120	3	72
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssase 72 g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++a ++i++l+ +++++++ TRIDC3AG044310.2 51 GGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEIDKLPPLQFPPHQV 120 78*************************************************************9999932 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MMSGNTQQQQ SAAAAEEEQE LARKHAAAVA TSRQWSSQTE SRIVRVSRVF GGKDRHSKVK 60 TVKGLRDRRV RLSVQTAIQL YDLQDRLGLN QPSKVVDWLL NAARHEIDKL PPLQFPPHQV 120 DLMDHMMTSS SMPLMPHVDD KFCHFASTLA GDGGVKAGAD ADGGGAHHNM GRFGYHRFMG 180 LNNNSLGLVN SGMPYNFTGE SWNNSSVHQS GGAGSPQVSI AAAAAAHHSA FPSLLSLAPR 240 SHQLVYYSSE ADQFPVDDLG SQSLSLSSAR AFHDQTGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	1e-39	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG044310.2