PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3AG042190.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 381aa MW: 41833.2 Da PI: 10.2776

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG042190.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.8	1.3e-20	3	92	14	99
T-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +rl +p kf++++ +g ke s+ tle +sgr+W+v + r++ +++++t+GW +Fv+++ L+e +f+vF++dg ++f +vf+k TRIDC3AG042190.2 3 KRLKIPPKFCKHIpweasrkaKGLKEASMAATLEGPSGRTWQVVI--RRTAEGTFFTAGWAKFVQDQALRELEFLVFRHDGGTSF--AAMVFDK 92 689*****888****6666799*************..*****************************9987777..7777766 PP
2	B3	51.2	2.3e-16	281	367	5	98
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +++ +v s ++++p f ++h ++e+++++l+d+ g+ W +i + + l++GW F++ n L+egD +vF+l+g ef +v+vf TRIDC3AG042190.2 281 MSTMHVYYSFMMRFPTGFSRQHL--PREKTEMVLRDPGGKAWAALYI--PSTRD-RLSRGWCAFARGNCLEEGDCCVFELVGAAEF--RVHVF 366 6788999999*******9995..345679***********4..44333.49*********************997777..99999 PP - CS B3 98 r 98 r TRIDC3AG042190.2 367 R 367 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
FKKRLKIPPK FCKHIPWEAS RKAKGLKEAS MAATLEGPSG RTWQVVIRRT AEGTFFTAGW 60 AKFVQDQALR ELEFLVFRHD GGTSFAAMVF DKSACEREDL LLAGDAPRPR RKRGRPRTAS 120 RALDDSAGME LVPYRAPADR PPQAACSDRM PESDKSNGTY AMAMCSVQHN ACNGLAGSAG 180 HPGPMKAEVG AGELPLCLIA APPSESGQLL PGHLPAGTKD GGAVKTRSIH GDLAAASIPP 240 SVRKYNGYVS RRRPVASAER QRAMELARAF RSSLPYCVIR MSTMHVYYSF MMRFPTGFSR 300 QHLPREKTEM VLRDPGGKAW AALYIPSTRD RLSRGWCAFA RGNCLEEGDC CVFELVGAAE 360 FRVHVFRVVE PAVPAVRLRL A

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

FKKRLKIPPK FCKHIPWEAS RKAKGLKEAS MAATLEGPSG RTWQVVIRRT AEGTFFTAGW  60
AKFVQDQALR ELEFLVFRHD GGTSFAAMVF DKSACEREDL LLAGDAPRPR RKRGRPRTAS  120
RALDDSAGME LVPYRAPADR PPQAACSDRM PESDKSNGTY AMAMCSVQHN ACNGLAGSAG  180
HPGPMKAEVG AGELPLCLIA APPSESGQLL PGHLPAGTKD GGAVKTRSIH GDLAAASIPP  240
SVRKYNGYVS RRRPVASAER QRAMELARAF RSSLPYCVIR MSTMHVYYSF MMRFPTGFSR  300
QHLPREKTEM VLRDPGGKAW AALYIPSTRD RLSRGWCAFA RGNCLEEGDC CVFELVGAAE  360
FRVHVFRVVE PAVPAVRLRL A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	112	RPRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-22	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG042190.2