PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG041600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HSF | ||||||||
Protein Properties | Length: 237aa MW: 26138.6 Da PI: 7.4556 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 99.5 | 3.3e-31 | 20 | 112 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 F+ k++++++d++++ ++ w +n+f+vld+ f++ +Lp+yFkh+nfaSFvRQLn+YgF+kv+ + weF+h+sF +g+ +ll TRIDC3AG041600.1 20 FVAKTFHMVSDPATDAVVCWGGASNTFLVLDPAAFSDFLLPSYFKHRNFASFVRQLNTYGFRKVDPDV---------WEFAHESFLRGQAKLL 103 9********************999****************************************9877.........**************** PP XXXXXXXXX CS HSF_DNA-bind 95 ekikrkkse 103 i rkk++ TRIDC3AG041600.1 104 PLIVRKKKR 112 *****9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
SMGSECKGHQ PQDDGGVAPF VAKTFHMVSD PATDAVVCWG GASNTFLVLD PAAFSDFLLP 60 SYFKHRNFAS FVRQLNTYGF RKVDPDVWEF AHESFLRGQA KLLPLIVRKK KRAGRELCEE 120 EEEVRGTIQA VQRLRDERRG MEEELQDMDR RLCAAENRPG QMMAFLGKLA DDPGVVLRAM 180 VAKKEELAAA GAGGKDSSPD KRRRIGADAG RGADAADQAA QSRAVPFPFS NLGQVFY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 201 | 205 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24520.1 | 2e-59 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG041600.1 |