PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG040840.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 406aa    MW: 42694.8 Da    PI: 6.3911
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG040840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.29.8e-18278312135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC3AG040840.1 278 CLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRL 312
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
AAPQIESLRA STALAAAMEA TAPDYYARDK KGSDLFVVDD LLALPCDDEE EEEEGVGDAP  60
FLPANAASAA AVVVKQEAGF GNASADSSTV TALDSCSNSF SGLADGDFSG GLCEPYDQLA  120
ELEWLSNYMG EGEESFATED LHKLQLISGI PSGGFPSANG PPAPAATAAT AQPGVFLPEG  180
PVPAKARSKR SRVAPGNWSS RLLVLPPAPA SPPSPASMAI SPAESGVSAQ AFHVKKPSKP  240
AKKKEVPPQA QAQAQTQSVS APTAPSGVTA AANEGRRCLH CETDKTPQWR TGPMGPKTLC  300
NACGVRYKSG RLVPEYRPAA SPTFVTSRHS NSHRKVLELR RQREMHHHHQ PSQLQQHAVA  360
GGVGRIMHME SHLLFDGPAA PPILGGGDDF LIHHRLGTAD YRQQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-47GATA family protein