PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG040200.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 586aa    MW: 62889.1 Da    PI: 9.8328
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG040200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM691.3e-21141436126
               NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk...sgyWkatgkdk 90 
                         hP+d el++ yL + v++ + +  ++++e+d+y + P+dL +     +++ ++++wyfF++ + k+++g+rk r++    +g W++    k
  TRIDC3AG040200.1  14 ASHPSDLELISTYLIPWVSTGERPW-KFVHEADVYAATPQDLARayapaTASDGQESWYFFTSLRAKSRRGQRKARTVGsgdHGCWHSERAAK 105
                       569*******************999.89**************74466655555788********************876455789******** PP

               NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmhey 126
                       ++++   +++++g ++ + f ++++ + +++ W+m e 
  TRIDC3AG040200.1 106 PLFAGigHSRQIGYRQAFSFATKEDGRLVRSGWLMAEI 143
                       ***99889999***********9999*********997 PP
2NAM65.71.3e-202834116126
               NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknra..tksgyWkatgkdke 91 
                         hP+d+ l++ yL+++v++ ++++ ++ ++vd+y++ P  L +     +++ +ek wyfF+    k+a+g+r+ r+  t +g W++    k+
  TRIDC3AG040200.1 283 ASHPSDQVLIKSYLTPRVASGQHPC-QFTHDVDVYTASPGALTRkysptMASDGEKAWYFFTLLPAKSAHGQRRPRTvgTGEGCWHSEAGVKP 374
                       569*******************999.89**************84367754555888********************6347799********** PP

               NAM  92 vlskkgelvglkktLvfy...kgrapkgektdWvmhey 126
                       vl+ +++ +g ++ + f    +g++ ++ ++ W+m e 
  TRIDC3AG040200.1 375 VLD-GDHPIGWRQFFSFMtkeEGQRVRSIRSGWIMVEI 411
                       ***.999***********77668888899******996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    
MAPIRRAAQR PDFASHPSDL ELISTYLIPW VSTGERPWKF VHEADVYAAT PQDLARAYAP  60
ATASDGQESW YFFTSLRAKS RRGQRKARTV GSGDHGCWHS ERAAKPLFAG IGHSRQIGYR  120
QAFSFATKED GRLVRSGWLM AEIGLNPDAS AEEELVLCKV YRSPRVGTGQ RSTAPAATGV  180
GPVRIGRGKA SEEDSTSSEE GTPRAAGPGC YSAQQPARVS ASTSGTLSME ESDSEQGSTS  240
RGGGVIGTSP SATPPRVPRS KALRAAQLPR IPTVPAAQRP DFASHPSDQV LIKSYLTPRV  300
ASGQHPCQFT HDVDVYTASP GALTRKYSPT MASDGEKAWY FFTLLPAKSA HGQRRPRTVG  360
TGEGCWHSEA GVKPVLDGDH PIGWRQFFSF MTKEEGQRVR SIRSGWIMVE IGLDHGKEEG  420
PSDELVLCKV YRSPRAGPVE PPAAAGRKRK SGDNYSGPAA PVLTLGPAAG ARNSTAASAS  480
SSGHKKRKTH SRNSSPVLRT ARGVLKLTRP VTSGRNKNTS ADRCARCGME PALSRRGTPD  540
AAAEEEDGSE TDLDEDDPMT GESGAPHCHK AGESSGRARP FYQFKI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1447488RKRKSGDNYSGPAAPVLTLGPAAGARNSTAASASSSGHKKRK
2485490KKRKTH
3486491KKRKTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.16e-15NAC family protein