PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG039530.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 203aa    MW: 23115.6 Da    PI: 11.7228
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG039530.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding476e-151462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      rg+W +eEdell  +v+ +G   +W + +++ g++R++k+c++rw++yl
  TRIDC3AG039530.4 14 RGPWAPEEDELLRSYVRSHGAVgNWIALPQKAGLNRCGKSCRLRWLNYL 62
                      89******************879************************97 PP
2Myb_DNA-binding35.22.9e-1171111446
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        T++Ed  +  + +  G++ W+ Ia++++ gRt++++k++w++
  TRIDC3AG039530.4  71 YTEQEDMVICSLYNSIGSR-WSIIASKLP-GRTDNDVKNYWNT 111
                       69*****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MGRAPCCDKA SVKRGPWAPE EDELLRSYVR SHGAVGNWIA LPQKAGLNRC GKSCRLRWLN  60
YLRPDIKHGG YTEQEDMVIC SLYNSIGSRW SIIASKLPGR TDNDVKNYWN TKLKKKAMAM  120
HQQHDDRHAT ARPAEPMRIV HAAVARVRLV RRHHGERRRG QLRRHVLPVP PGRATRSLQR  180
QRGGAARRIP GHADAGRRQQ LGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37780.11e-68MYB family protein