PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG038870.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family RAV
Protein Properties Length: 315aa    MW: 33413.6 Da    PI: 10.0311
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG038870.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.11.6e-1163111155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s++kGV   + +grW A+I++      r +r++lg+f  + +Aa+a++ a+++++g
  TRIDC3AG038870.3  63 SRFKGVVPQP-NGRWGAQIYE------RhQRVWLGTFAGEADAARAYDVAAQRFRG 111
                       689***9788.8*********......44**********99*************98 PP
2B397.49.2e-31175267186
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       f+k+ tpsdv+k++rlv+pk++ae+h        g  + ++  l +ed  g++W+++++y+++s++yvltkGW++Fvk++gL +gD+v F++ 
  TRIDC3AG038870.3 175 FDKTVTPSDVGKLNRLVIPKQHAEKHfplqlpaaG-GESKGLLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLGAGDVVGFYRA 266
                       89*******************************53.456888************************************************965 PP

                       S CS
                B3  86 g 86 
                        
  TRIDC3AG038870.3 267 A 267
                       4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
DTSSGGAAST DKLKALAAAA AAAAAGPLER MGSGASAVLD AAEPGSEADS GGRAAPAGKL  60
PSSRFKGVVP QPNGRWGAQI YERHQRVWLG TFAGEADAAR AYDVAAQRFR GRDAVTNFRP  120
LADADPDAAA ELRFLAARSK AEVVDMLRKH TYFDELAQSK RASPPTPAAA REHLFDKTVT  180
PSDVGKLNRL VIPKQHAEKH FPLQLPAAGG ESKGLLLNFE DAAGKVWRFR YSYWNSSQSY  240
VLTKGWSRFV KEKGLGAGDV VGFYRAAAGS TGEASKLFID CKQRPSTNSP APADPVDQSP  300
APVHKAVRIF GVDLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13260.11e-100RAV family protein