PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3AG037630.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 136aa MW: 15559.8 Da PI: 10.3802

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG037630.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61	2.6e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv++++ +G g+W++++r g+ R++k+c++rw +yl TRIDC3AG037630.3 14 RGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYL 61 789*******************************************97 PP
2	Myb_DNA-binding	56.8	5.2e-18	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE+ l+vd+++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC3AG037630.3 67 RGSFSQEEEALIVDLHRVLGNR-WAQIAKHLP-GRTDNEVKNFWNS 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence
MGHHSCCNKQ KVRRGLWSPE EDEKLVKYIT AHGHGCWSSV PRQAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SQEEEALIVD LHRVLGNRWA QIAKHLPGRT DNEVKNFWNS TIKKKLISQA 120 VGSLHYGNIP SSAGNW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	3e-77	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG037630.3