PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG036810.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1430aa MW: 160602 Da PI: 6.3738

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG036810.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1.1e-17	18	72	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++ql++Le+ + ++yps+++r+eL+ k+gL++rq ++WF+ rR k++k TRIDC3AG036810.1 18 KRMMKTPYQLDVLEQTYLAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRK 72 79999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1430 aa Download sequence
SASGGAAGPS GSGEKPVKRM MKTPYQLDVL EQTYLAEQYP SEAMRAELSV KIGLSDRQLQ 60 MWFCHRRLKD RKPPAKRQRR DEEGPATPVP VPPPVLPLQA MPLASTDLMM SAGSPYDEPL 120 LPLAHSRRGA GRSSAVPRIS APDIGRDIGR RYYEPLPVML PPPVAPMQFR QAELRVITSV 180 ESQLGEPLRE DGPVLGVDFD PLPPGAFGAP IVPEQQKQPV RSYDAKIFSR HDPNLLKVSS 240 FLPSMEHPFV PNSFAGKRKS TVGNPPPQVH PHGGSRAVHE YQFLPEQPSD TYERASRSHY 300 YDTPVEASNS RIPSLTPGPH LLHGSEDMVP GYAFEGQGLL PQSGRPQVFP AVSTDYEMNQ 360 SNSNINSVPV DGQFGSSHVA GFEDPLISSE TRAYHDEDAS RVDRKRKHNE EAKIAKEVEA 420 HEKRIRKELE KQDILRRKRE EQMRKEMERH DRERRKEEER LLRERQREEE RFQREQRREH 480 ERMEKFLQKQ SRRAEKQRQK EELRKEKEMA RQKAANERAT ARRIAREYME LVEDERLELM 540 ELAAQSKGLP SMLCLDSDTL QQLDSFRGML SQFPPEMVRL KVPLSIKPWT GSEESVGKLL 600 MVWKFLITFA DVLELSSVTL DEFIQSLHDY DSRLLGELHV ALLKSIIKDI EDVARTPSVA 660 LGVNPGGGHP QIVEGAYSWG FNIRNWQRHL NLLTWPEILR QFALSAGFGP QLKKRNAEDV 720 FYRDENEGQD GQNVISALRN GSAAVRAAAL MKERGYTHRR SRHRLTPGTV KFAAFHVLSL 780 EDSSGLTILE VAEKIQKSGL RDLTTSKTPE ASIAAALSRD TKLFERTAPS TYCVKSPYRK 840 DPADSEPVLS AAREKIRAFQ NVLSDSEAEK EVDDVRDEES DCDDDPDGDD VNIEVGDEKD 900 PLLAVKAQGV VPTATKVGEV KGDPDGLGAA LTRPISSTTS RKDIAMLSLG DSSAVGTSSV 960 SPLRASSDHP EVITGDAEDT QIDESNQGES WVQGLAEGDY CDLSVEERLN ALVALVGVAT 1020 EGNSIRAVLE ERLEAANAIK KQMWAEAQLD KRRSKEEFAS KVQYNSYTSL KADVIPENNA 1080 TETTPTPVRN LDIDNDENAG TSNNNEILNQ QSNAGNASYE RNGTGQETSA TPDNLSAQQY 1140 AYADKTRSQL KSYIGHRAEQ LYVYRSLPLG QDRRRNRYWQ FSTSTSPNDP GSGRIFFESR 1200 EGYWRVIDSE EVFDALVASL DTRGSREAQL HSMLQRVEST FKEGIKRKQG AAIEQSAGRY 1260 LKNGATDTMR ASYRSEFGSP SSTLSSVSAD SATTYSDSFK IELGRNDVEK ISISKRADSF 1320 LKWMWSECCD RQLTCAMKYG EKRCSALMHS CNYCYQIYLA EERHCSSCHK TFKSIYNYSE 1380 HTSQCEEKRR TDPNWKMQIA DYSVPIGMRL LKLQLATIEV KFLLVVCFSV

Sequence ? help Back to Top

Protein Sequence Length: 1430 aa Download sequence

SASGGAAGPS GSGEKPVKRM MKTPYQLDVL EQTYLAEQYP SEAMRAELSV KIGLSDRQLQ  60
MWFCHRRLKD RKPPAKRQRR DEEGPATPVP VPPPVLPLQA MPLASTDLMM SAGSPYDEPL  120
LPLAHSRRGA GRSSAVPRIS APDIGRDIGR RYYEPLPVML PPPVAPMQFR QAELRVITSV  180
ESQLGEPLRE DGPVLGVDFD PLPPGAFGAP IVPEQQKQPV RSYDAKIFSR HDPNLLKVSS  240
FLPSMEHPFV PNSFAGKRKS TVGNPPPQVH PHGGSRAVHE YQFLPEQPSD TYERASRSHY  300
YDTPVEASNS RIPSLTPGPH LLHGSEDMVP GYAFEGQGLL PQSGRPQVFP AVSTDYEMNQ  360
SNSNINSVPV DGQFGSSHVA GFEDPLISSE TRAYHDEDAS RVDRKRKHNE EAKIAKEVEA  420
HEKRIRKELE KQDILRRKRE EQMRKEMERH DRERRKEEER LLRERQREEE RFQREQRREH  480
ERMEKFLQKQ SRRAEKQRQK EELRKEKEMA RQKAANERAT ARRIAREYME LVEDERLELM  540
ELAAQSKGLP SMLCLDSDTL QQLDSFRGML SQFPPEMVRL KVPLSIKPWT GSEESVGKLL  600
MVWKFLITFA DVLELSSVTL DEFIQSLHDY DSRLLGELHV ALLKSIIKDI EDVARTPSVA  660
LGVNPGGGHP QIVEGAYSWG FNIRNWQRHL NLLTWPEILR QFALSAGFGP QLKKRNAEDV  720
FYRDENEGQD GQNVISALRN GSAAVRAAAL MKERGYTHRR SRHRLTPGTV KFAAFHVLSL  780
EDSSGLTILE VAEKIQKSGL RDLTTSKTPE ASIAAALSRD TKLFERTAPS TYCVKSPYRK  840
DPADSEPVLS AAREKIRAFQ NVLSDSEAEK EVDDVRDEES DCDDDPDGDD VNIEVGDEKD  900
PLLAVKAQGV VPTATKVGEV KGDPDGLGAA LTRPISSTTS RKDIAMLSLG DSSAVGTSSV  960
SPLRASSDHP EVITGDAEDT QIDESNQGES WVQGLAEGDY CDLSVEERLN ALVALVGVAT  1020
EGNSIRAVLE ERLEAANAIK KQMWAEAQLD KRRSKEEFAS KVQYNSYTSL KADVIPENNA  1080
TETTPTPVRN LDIDNDENAG TSNNNEILNQ QSNAGNASYE RNGTGQETSA TPDNLSAQQY  1140
AYADKTRSQL KSYIGHRAEQ LYVYRSLPLG QDRRRNRYWQ FSTSTSPNDP GSGRIFFESR  1200
EGYWRVIDSE EVFDALVASL DTRGSREAQL HSMLQRVEST FKEGIKRKQG AAIEQSAGRY  1260
LKNGATDTMR ASYRSEFGSP SSTLSSVSAD SATTYSDSFK IELGRNDVEK ISISKRADSF  1320
LKWMWSECCD RQLTCAMKYG EKRCSALMHS CNYCYQIYLA EERHCSSCHK TFKSIYNYSE  1380
HTSQCEEKRR TDPNWKMQIA DYSVPIGMRL LKLQLATIEV KFLLVVCFSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG036810.1