PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG036030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 234aa MW: 24494.3 Da PI: 7.584 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.5 | 2.4e-20 | 109 | 143 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++ TRIDC3AG036030.1 109 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 143 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MLHEAAPCTC GLLYGSCGGG CSMLFAAAPG DHHYYIKQCG DDGSYASYGG SVDCTLSLGT 60 PSTRRAEAGV RAPAAGLPWE AVPSCNGRQD IGPARADQSN AGAASARRCA NCDTTSTPLW 120 RNGPRGPKSL CNACGIRYKK EERRAAAAAV APTALASDSG IEYAYGYARH HHHQQQQQQQ 180 WGCYGPAVAK AASYGLFGDA AAEDGPCLPW GLGVMPSSPA FGSVREMTSL FQYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18380.1 | 4e-26 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG036030.1 |