PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG034340.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 170aa MW: 19068.2 Da PI: 8.4781 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5e-16 | 29 | 72 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++eEd + +++ +lG++ W+ Ia++++ gRt++++k++w++ TRIDC3AG034340.3 29 RGSISPEEDMVIRELHSRLGNK-WAEIAKHLP-GRTDNEVKNYWRT 72 7889******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
LARSAAGLNR NGKSCRLRWL NYLRPGLRRG SISPEEDMVI RELHSRLGNK WAEIAKHLPG 60 RTDNEVKNYW RTKVHKKAPG HQKQLPATSE ATSSVSASTS HASSTVGDEY TQTSFPYPDL 120 SWVAADHHET VDVGASATRF FPSEFGGNFW NVQDNFWETL PLSDPVYEAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 2e-36 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG034340.3 |