PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG033880.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 299aa    MW: 33136.7 Da    PI: 6.8524
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG033880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind88.96.3e-28251232102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT.......TEEE---SSBTTTTXTTSEEEEESXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY.......gFkkvkdeekkskskekiweFkhksFk 87 
                       F+ k+y+++ d++++ l++w + +nsf+v+d   f++ +Lp +Fkh nf+SFvRQLn+Y       gF+kv+         ++ weF+h+sF 
  TRIDC3AG033880.1  25 FVAKTYQMVCDPRTDALVRWGKGNNSFLVTDVAGFSQLLLPCFFKHGNFSSFVRQLNTYvngilvqGFRKVH---------PDRWEFAHESFL 108
                       9**********************************************************4444444444444.........556********* PP

                       XXXXXXXXXXXXXXX CS
      HSF_DNA-bind  88 kgkkellekikrkks 102
                       +g+++ll +i r+k+
  TRIDC3AG033880.1 109 RGQTHLLPRIVRRKK 123
                       ************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDGLHTELAL GLIGCGHGDL QTAPFVAKTY QMVCDPRTDA LVRWGKGNNS FLVTDVAGFS  60
QLLLPCFFKH GNFSSFVRQL NTYVNGILVQ GFRKVHPDRW EFAHESFLRG QTHLLPRIVR  120
RKKRGEAGAG ASCSSAVGGG EQHQHVVANM GDQVEEEEDE EGREALLEEV QRLRQEQTAI  180
GEQLAKMSRR LQATERRPDR LMSFLSKLAE DPNATSLHLL EQAAEKKRQR MQCPSRDFTS  240
FPVALPLHPA PSPPPPPLLA LGDPTMGGVR VWQWAEPMPL ALTTFEQPSA SSGVQQVPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.13e-51HSF family protein