PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG030770.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 301aa    MW: 34021.4 Da    PI: 8.6773
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG030770.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.4e-0583103323
                       ETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                       C++Cgk F r  nL+ H r H
  TRIDC3AG030770.1  83 CEICGKGFQRDQNLQLHRRGH 103
                       *******************88 PP
2zf-C2H212.10.0006158180123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       +kC +C+k +  +s+ k H + +
  TRIDC3AG030770.1 158 WKCDKCSKKYAVQSDWKAHSKIC 180
                       58*****************9876 PP
3zf-C2H212.50.00045188206523
                       TTTEEESSHHHHHHHHHHT CS
           zf-C2H2   5 dCgksFsrksnLkrHirtH 23 
                       dCg++Fsr++++ +H   +
  TRIDC3AG030770.1 188 DCGTVFSRRDSFITHRAFC 206
                       9**************8765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MYHHHLQQQQ QQRGEAEAAD QDQDSSMSNL TTSASASAKP PPPPPPTPAS NKRKRSLPGN  60
PDPESEVVAL SPATLMATNR FLCEICGKGF QRDQNLQLHR RGHNLPWKLK QRGSKEVVRK  120
KVYICPEASC VHHDPSRALG DLTGIKKHFF RKHGEKKWKC DKCSKKYAVQ SDWKAHSKIC  180
GTREYKCDCG TVFSRRDSFI THRAFCDALT EESNKAISGG GLPLPPIAHA QHHAMLYSPH  240
DLMQQHHHQE LAAFQDHQHQ VMQQNCNFDV KPEMQPWPTM PYDDVHHPLL QPLCSATAQS  300
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108121KLKQRGSKEVVRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55110.15e-97C2H2 family protein