PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG026130.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 300aa MW: 32933.4 Da PI: 8.6076

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG026130.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.9e-16	45	90	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ TRIDC3AG026130.3 45 RGHWRPAEDARLKELVGQYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 90 899***************************.*********996 PP
2	Myb_DNA-binding	56.1	8.5e-18	97	141	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eE+++l a++ +G++ W++Iar ++ gRt++ +k++w+ + TRIDC3AG026130.3 97 RRAFTEEEEDRLMAAHRAYGNK-WALIARLFP-GRTDNAVKNHWHVL 141 678*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MAREMNGFFS HPPAPPPAPY PQEEAAADVD DAEDGGGGQG KLCSRGHWRP AEDARLKELV 60 GQYGPQNWNL IAEKLDGRSG KSCRLRWFNQ LDPRINRRAF TEEEEDRLMA AHRAYGNKWA 120 LIARLFPGRT DNAVKNHWHV LMARRQREQS GAFRRRSKPA SSSSSSIAPA PHHPAPAVVL 180 QHQHQHQHLY QHHGYSGGES DESASTCTTD LSLSSGSAAV PCFYHHQAPS SCCFVASSVV 240 SPPHGHGQRF DPTPTDMVVF GAGYDMAPQA HAVTQAFSPS ARSAFSAPSS SSARQQQRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	5e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG026130.3