PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG022940.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 272aa    MW: 29230.8 Da    PI: 9.4239
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG022940.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK73.62.5e-231461451
            RWP-RK  4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51
                      ++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rki s
  TRIDC3AG022940.3 14 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVS 61
                      6899*****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
QPQAQAQIKP TRVSLSYEEI SKLFSLPIAE AASILGVCTS VLKRICRTHG IVRWPYRKIV  60
SGKGDDAKNA EREKAMQLLE LSKIAKQKAI SSSGSLATSS SGAFQGVPKA QQGSAKAGTA  120
IGRQNAPSLS QFSQAKDIPT YMDDFKYGFP SSGLSTETMK WWGTDSHTET APAKDDNREG  180
SESTNEASKG TDDELDWGAD EPEADADGVA AATDPSAQLC SLRRKAAGDG RRLLNGDTGR  240
VQQLCRLNKR QKIVLAQVFG ASLPEQRRSK LA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.12e-10Nin-like family protein