PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG022940.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 278aa    MW: 29742.4 Da    PI: 9.1732
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG022940.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK73.62.5e-232067451
            RWP-RK  4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51
                      ++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rki s
  TRIDC3AG022940.2 20 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVS 67
                      6899*****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
ALALVPQPQA QAQIKPTRVS LSYEEISKLF SLPIAEAASI LGVCTSVLKR ICRTHGIVRW  60
PYRKIVSGKG DDAKNAEREK AMQLLELSKI AKQKAISSSG SLATSKSLSR SSSGAFQGVP  120
KAQQGSAKAG TAIGRQNAPS LSQFSQAKDI PTYMDDFKYG FPSSGLSTET MKWWGTDSHT  180
ETAPAKDDNR EGSESTNEAS KGTDDELDWG ADEPEADADG VAAATDPSAQ LCSLRRKAAG  240
DGRRLLNGDT GRVQQLCRLN KRQKIVLAQV FGASLPEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.12e-10Nin-like family protein