PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG022940.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 140aa MW: 14974.4 Da PI: 10.5256

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG022940.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	75.3	7.4e-24	40	87	4	51
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rki s TRIDC3AG022940.1 40 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVS 87 6899*****************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 140 aa Download sequence
SAQELPPAQQ QPAAEQAPSL ALALVPQPQA QAQIKPTRVS LSYEEISKLF SLPIAEAASI 60 LGVCTSVLKR ICRTHGIVRW PYRKIVSGKG DDAKNAEREK AMQLLELSKI AKQKAISSSG 120 SLATSKSLSR STKCAKPVPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	3e-11	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG022940.1