PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG021790.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 348aa    MW: 37786.7 Da    PI: 6.6173
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG021790.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK53.64.3e-1721492452
            RWP-RK 24 eLgvclTvLKriCRqyGIkRWPhRkiksl 52
                       L vc+T++KriCRq+GI+RWP+Rki+++
  TRIDC3AG021790.9 21 GLTVCPTTMKRICRQHGISRWPSRKINKV 49
                      588************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MVITLSGFYC WMLALANYIS GLTVCPTTMK RICRQHGISR WPSRKINKVN RSLSKLKQVI  60
ESVQGSDAAF NLTSITGPLP TIPVGPSSDS FNKEKASESK AEHSNRAVDG DRDSSLQKPQ  120
ENGSHFGALM SQQGFADTGN NVQLEADKAS LSRSSSGEGS INSRTSEGSC QGSPANQTFV  180
CQPIASMFLE PQEPQLNPEG FTKEPFQEPE LPLSRMLIED SGSSKDLKNL FGSAIGQPML  240
APPSNFGPMR NSGTVTIKAS FKEDIVRFRF PCSSSVMALK DEVAKRLRMD AGMFDIKYLD  300
DDHEWVKLAC NADLEECIEI SRHSGTHVIR LLVTDVAAHI GSSCGSSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43500.11e-44Nin-like family protein