PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021790.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 581aa MW: 63436.1 Da PI: 6.1411

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021790.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.6	2.9e-29	231	282	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ TRIDC3AG021790.7 231 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 282 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MGEVCMSTSD VAFHVIDAHM WGFRDACVEH HLQKGQGVSG KAFIYHRPCF SKDISQFCKL 60 EYPLVHYARM FGLAGCFAIC LQSPYTGDDY YMLEFFLPPS CKEEDDQNAL LESILGLINQ 120 CLRNLKVAGN GESNEASLQL SNVIMIESED FKTNVHFENS EGFRESPEGD THGGAHEFDK 180 ANSKVSEGHL LADDNSQNNG VSVSRPNGSA ASDSSLLHKN GKPPERRRGK AEKTISLEVL 240 QQYFSGSLKN AAKSLGVCPT TMKRICRQHG ISRWPSRKIN KVNRSLSKLK QVIESVQGSD 300 AAFNLTSITG PLPTIPVGPS SDSFNKEKAS ESKAEHSNRA VDGDRDSSLQ KPQENGSHFG 360 ALMSQQGFAD TGNNVQLEAD KASLSRSSSG EGSINSRTSE GSCQGSPANQ TFVCQPIASM 420 FLEPQEPQLN PEGFTKEPFQ EPELPLSRML IEDSGSSKDL KNLFGSAIGQ PMLAPPSNFG 480 PMRNSGTVTI KASFKEDIVR FRFPCSSSVM ALKDEVAKRL RMDAGMFDIK YLDDDHEWVK 540 LACNADLEEC IEISRHSGTH VIRLLVTDVA AHIGSSCGSS G

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MGEVCMSTSD VAFHVIDAHM WGFRDACVEH HLQKGQGVSG KAFIYHRPCF SKDISQFCKL  60
EYPLVHYARM FGLAGCFAIC LQSPYTGDDY YMLEFFLPPS CKEEDDQNAL LESILGLINQ  120
CLRNLKVAGN GESNEASLQL SNVIMIESED FKTNVHFENS EGFRESPEGD THGGAHEFDK  180
ANSKVSEGHL LADDNSQNNG VSVSRPNGSA ASDSSLLHKN GKPPERRRGK AEKTISLEVL  240
QQYFSGSLKN AAKSLGVCPT TMKRICRQHG ISRWPSRKIN KVNRSLSKLK QVIESVQGSD  300
AAFNLTSITG PLPTIPVGPS SDSFNKEKAS ESKAEHSNRA VDGDRDSSLQ KPQENGSHFG  360
ALMSQQGFAD TGNNVQLEAD KASLSRSSSG EGSINSRTSE GSCQGSPANQ TFVCQPIASM  420
FLEPQEPQLN PEGFTKEPFQ EPELPLSRML IEDSGSSKDL KNLFGSAIGQ PMLAPPSNFG  480
PMRNSGTVTI KASFKEDIVR FRFPCSSSVM ALKDEVAKRL RMDAGMFDIK YLDDDHEWVK  540
LACNADLEEC IEISRHSGTH VIRLLVTDVA AHIGSSCGSS G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-105	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021790.7